glob

Scan files using * based glob statement and open all files as input.

Parameters

Name	Description
storeFilename	Store value of filename in parameter each row
input	Path of avro object file to transform
xml	xmlLoad configutation
table	Run transform pipeline on a TSV or CSV
json	Run a transform pipeline on a multi line json file
avro	Load data from avro file

Example

inputs:
  pubmedRead:
    glob:
      path: "{{params.baseline}}/*.xml.gz"
      xml: {}